phlower
Getting started
About PHLOWER
Installation
Tutorial
API Reference
API
tools:
tl
difusion map
hodge laplacian decomposition to infer trajectory
clustering
dimensionality reduction
tree analysis
phlower.tl.tree_2branch_markers
phlower.tl.tree_mbranch_markers
phlower.tl.find_branch_start
phlower.tl.find_branch_end
phlower.tl.find_a_branch_all_predecessors
phlower.tl.helping_merged_tree
phlower.tl.helping_submerged_tree
phlower.tl.find_samelevel_daugthers
phlower.tl.TF_gene_correlation
phlower.tl.branch_TF_gene_correlation
phlower.tl.tree_branches_smooth_window
phlower.tl.branch_heatmap_matrix
phlower.tl.print_stream_labels
phlower.tl.change_stream_labels
phlower.tl.fate_tree_full_dataframe
phlower.tl.assign_graph_node_attr_to_adata
phlower.tl.get_tree_leaves_attr
phlower.tl.get_all_attr_names
phlower.tl.tree_label_dict
phlower.tl.tree_original_dict
phlower.tl.end_branch_dict
phlower.tl.branch_regulator_detect
phlower.tl.mbranch_regulator_detect
adata
external:
ext
plotting:
pl
datasets
Datasets
downstream
Regulators
phlower
API
phlower.tl.print_stream_labels
View page source
phlower.tl.print_stream_labels
phlower.tl.
print_stream_labels
(
adata
,
tree
=
'stream_tree'
,
attr
=
'original'
)