phlower
Getting started
About PHLOWER
Installation
Tutorial
API Reference
API
tools:
tl
difusion map
hodge laplacian decomposition to infer trajectory
clustering
phlower.tl.leiden
phlower.tl.louvain
phlower.tl.dbscan
phlower.tl.gaussianmixture
phlower.tl.spectralclustering
phlower.tl.agglomerativeclustering
dimensionality reduction
tree analysis
adata
external:
ext
plotting:
pl
datasets
Datasets
downstream
Regulators
phlower
API
phlower.tl.agglomerativeclustering
View page source
phlower.tl.agglomerativeclustering
phlower.tl.
agglomerativeclustering
(
embedding
,
distance
=
'euclidean'
,
n_clusters
=
2
,
metric
=
'euclidean'
,
memory
=
None
,
connectivity
=
None
,
compute_full_tree
=
'auto'
,
linkage
=
'ward'
,
distance_threshold
=
None
)